Tested Platforms¶
So far uap has been tested on several operating systems (OS) and cluster engines. The tables below list the combinations of OS and cluster engine we successfully tested.
download_human_gencode_release.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | ✓ | untested | ✓ |
Ubuntu | untested | untested | ✓ | ✓ |
index_homo_sapiens_hg19_genome.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | ✓ | untested | ✓ |
Ubuntu | untested | untested | ✓ | ✓ |
index_mycoplasma_genitalium_ASM2732v1_genome.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | ✓ | untested | ✓ |
Ubuntu | untested | untested | ✓ | ✓ |
2007-CD4+_T_Cell_ChIPseq-Barski_et_al_download.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | ✓ | untested | ✓ |
Ubuntu | untested | untested | ✓ | ✓ |
2007-CD4+_T_Cell_ChIPseq-Barski_et_al.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | ✓ | untested | ✓ |
Ubuntu | untested | untested | ✓ | ✓ |
2014-RNA_CaptureSeq-Mercer_et_al_download.yaml |
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UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | untested | untested | untested |
Ubuntu | untested | untested | ✓ | ✓ |
2014-RNA_CaptureSeq-Mercer_et_al.yaml |
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---|---|---|---|---|
UGE | OGE/SGE | SLURM | local machine | |
Cent OS | ✓ | untested | untested | ✓ |
Fedora | untested | untested | untested | untested |
Ubuntu | untested | untested | ✓ | ✓ |